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Detailed information on CNT30128751


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534838Corymbia citriodoraEucalyptus grandis26.9225.9590.51137forward
CNT3021436Corymbia citriodoraCitrullus lanatus22.435.483.33114forward
CNT30157163Corymbia citriodoraPistacia vera52.6561.0580.6268forward
CNT30562763Corymbia citriodoraActinidia chinensis50.8856.4381.85259forward
CNT30553156Corymbia citriodoraOryza glaberrima21.6117.3882.73110forward
CNT30146603Corymbia citriodoraMedicago truncatula38.1151.1984.02194forward
CNT30362074Corymbia citriodoraSorghum bicolor29.6726.8286.09151forward
CNT30355647Corymbia citriodoraLactuca sativa35.7627.2580.22182forward
CNT30369917Corymbia citriodoraOryza glumipatula36.7430.9181.82187forward
CNT30154533Corymbia citriodoraPrunus persica20.4323.6989.42104forward
CNT30706321Corymbia citriodoraPrunus avium89.1982.2580.4454forward
CNT3026328Corymbia citriodoraPopulus trichocarpa67.7865.3484.93345forward
CNT30113754Corymbia citriodoraFicus carica36.1544.9982.61184forward

Expression of CNT30128751

Peptides detected in this lncRNA

>peptide 1 (65 aa)
YTGKPTYPQPLGNFSFWQLNQESPVSAITADSLESMPCMCWNRTFTLKGSLGSHFKGCPSGTKIL*

Sequence

>CNT30128751
CTATACAGGCAAACCCACATACCCGCAGCCTCTTGGTAATTTCAGCTTCTGGCAGTTGAACCAAGAGTCTCCAGTCTCAGCAATCACAGCTGATTCACTA
GAGAGCATGCCCTGTATGTGCTGGAACAGGACATTCACCCTCAAGGGCTCCTTGGGTTCACACTTCAAAGGTTGTCCATCTGGAACAAAAATCCTTTGAT
AATTCTCATAAGCAGTGGTATTCTGCTTAAGCCTCTTCGAGAGTGCTTTAAGGAAATCCTTCATCAGAACACAACCAAAAGCGGGTCCATTTCCAATCAC
GACCCTATCAGGCTCCAAAATAATGGCCTTCTCCTTCTTGAGAAGGAGGGAATACCCAACAGAGCTGTAGTCATTGAAAATGGACCCAGCAAATAAGTAG
GCATCTGCGGATTCCACAATCTCGGCACAGAATGCAGTGCTCACCGCACCCCAGTAAGTCCCAATGAAGTGGGCATGGTGCTCAGGCACGAGCCCTTTAG
CCGATGGCA