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Detailed information on CNT30119048


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10716|CYSP1_MAIZE, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567329Citrus clementinaActinidia chinensis14.9821.4583.7286forward
CNT30588616Citrus clementinaMusa acuminata12.0228.2888.4169forward

Expression of CNT30119048

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MYGHETPPIYVCIQTALIPTAKANSKISTNSVIILSIPFNKKITNI

>peptide 2 (36 aa)
MPQPTHVGIVIIADGYLKGYPIISRYRSSTCLAQPP*

>peptide 3 (43 aa)
MRPWSRPHRHCDPCRSYNIHSLPRSIAHDKHSMIQILPANVWA*

Sequence

>CNT30119048
ACATAAAAAGAAAATATAACATTATAATATTTCTACAAGCCTGCCCAATATAAAAAGAAAATATTAATACCATCTTCAATAACAATTCTGTAGCATGGTT
AACTATAAAATAGATAAATATTACATTCTGACATGACATATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCCCACGCATGTAGGCATCGT
TATAATTGCAGACGGATATTTAAAAGGATATCCTATAATATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAATGTCTAGCTTGAGGTTGT
ATGGATAGCAGCTACAGATGAGACCATGGAGTCGACCCCACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTCCCCAGATCCATAGCCCA
CGATAAGCACTCCATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATATATGTTTGCATCCAAACGGCATTGATACCCACTGCAAA
AGCAAACAGCAAGATCAGCACAAATTCTGTCATCATTCTATCCATTCCGTTTAATAAAAAAATTACCAACATCT