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Detailed information on CNT30118305


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FID0|GL114_ARATH, E-value = 8e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30572973Citrus clementinaVitis vinifera25.1425.7381.18186forward

Expression of CNT30118305

Peptides detected in this lncRNA

>peptide 1 (31 aa)
KAWLLNKNNNKLCLLHGYNQPGERFMRELFF*

>peptide 2 (42 aa)
MLKIFHCLRVQLERLGKKIGIDWRIGSKDRVGYGNFTGELAV*

>peptide 3 (68 aa)
MSQNRREEFLPGPTGFHWHGGEYEVAFGHMAHSQYGMLICQGVKSWNLLNICICHTKAKSICCVSRLV*

Sequence

>CNT30118305
AAAGGCTTGGCTGCTAAATAAAAACAACAATAAATTATGTTTATTACATGGCTACAATCAGCCTGGAGAGAGGTTCATGAGAGAGCTTTTTTTTTAACAT
TAATTAAGATATGATAATCTGGAGCTAAAACAATAAAGCCACTAGTGAAGAGGCCATTTATATTAAAGCTCATTAATTCCTTCTCCTAATCGCCATTAAT
GAACTTATGCTGAAGATCTTTCACTGTCTTCGGGTCCAACTGGAACGCCTTGGCAAGAAAATCGGGATTGATTGGAGGATTGGCTCCAAAGACCGCGTCG
GCTATGGTAATTTCACCGGGGAACTGGCTGTTTAGAGCAGAATAGGCAACTGCATTTGTTTTTCCAATGTTGAATTGGAAATGAATCAAACCAATTGGAA
ACACAAAAGCATCTCCCTTATTCAGAACTTTTGAGATGAGTGTGTTATTCAGTTGGTCTGATGTCACAAAACCGACGTGAAGAGTTCCTTCCAGGACCAA
CAGGATTTCACTGGCACGGGGGTGAATATGAGGTGGCCTTTGGCCATATGGCGCATAGTCAATACGGAATGCTGATATGCCAAGGTGTTAAGTCCTGGAA
TTTGCTCAACATTTGCATTTGTCACACTAAAGCCAAGTCGATTTGCTGTGTTTCCAGGCTTGTCTAGCCCTGGTAAAAAGAAATCTTCTGCTTTCGCAAG
CTTGGGGTCCTTGCAGAACTTCCCATTCACAAACACTACA