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Detailed information on CNT30117514

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696275	Oryza nivara	Oryza sativa	100	46.33	100	581	forward
CNT30103332	Oryza nivara	Oryza rufipogon	100	59.77	99.83	581	forward

Expression of CNT30117514

Peptides detected in this lncRNA

>peptide 1 (90 aa)
VSGRRCGMQQVAGPFYHVLTDRSAEQEKVQNQHTSVAAAIKYGIHCHVKSMSIGKRTDVDSYLSNLYIKCGQENNEDTKELMWSERHAYI*

Sequence

>CNT30117514
AGTGAGCGGCAGGAGATGTGGGATGCAACAAGTGGCTGGGCCGTTTTATCACGTTCTGACGGATAGAAGTGCAGAGCAAGAGAAAGTTCAGAACCAACAC
ACATCTGTCGCCGCAGCAATCAAATATGGTATACATTGCCATGTGAAAAGCATGTCGATCGGCAAAAGAACAGATGTGGACTCTTATCTGTCGAATCTTT
ATATTAAGTGTGGACAGGAGAATAATGAGGACACCAAAGAATTGATGTGGTCCGAGAGGCATGCATATATATAGAAGAAGAAAAAACTAACGACTGGAGA
TCGAATATTTCTTGTGCAAAAACATTGAAGCGGCCTCCTGCACACTTGTGGTCCAAATAAACTAGCTAGTTACATTTAAATGGGAAAAATATCTGTTTTG
TTTGGTACAGAGTAAAATGTAATTTTTTTTGCCGCCTATTCCTAGAATAATCTAATCCTAATTTGAATTATTTGTAAAATATATTTTGACGGAGATCTTT
TGTTTTCTTTTTGAAAGAAAACGTGGCTCTATGTTTTAATCTAGACTGTTATATTATGAATATGATCGGAGTACATCCCAT