Detailed information on CNT30116203


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101017Oryza nivaraOryza rufipogon45.19100100202forward

Expression of CNT30116203

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MLRSHHSRRGPAATGRRNQSAKGGDGGDGRASREEDGATAPAEHRRRKTALRHGGRKTAQRRRREDEDLGIFGREAARMSRRWLVW

>peptide 2 (38 aa)
RGRRSQRRDFPRSARTQRRRLGRRTRGGFGDEKRNQGG*

>peptide 3 (50 aa)
MARRRQPSIAGGRQRCGMVGGRQRSGGAEKTRIWGFLAGRRRGCLGGGWCG

Sequence

>CNT30116203
AGCGAGGGCGGCGAAGCCAGCGCCGTGATTTCCCTCGCTCCGCAAGAACGCAGCGGCGCCGGCTAGGGCGGCGAACCAGGGGAGGATTTGGGGATGAGAA
AAGGAATCAGGGAGGATGATTCACGAATTAACTTGAGAACCTGGGTAAGGGGACAGAGAGGTAGATCAGGATAGCGGTGGTGGCGCCATGCTTCGTAGCC
ACCACAGTCGCCGAGGTCCGGCGGCGACGGGCCGAAGGAATCAATCCGCAAAAGGCGGCGACGGCGGTGACGGTCGGGCGTCGCGGGAGGAAGATGGCGC
GACGGCGCCAGCCGAGCATCGCAGGAGGAAGACAGCGCTGCGGCATGGTGGGAGGAAGACAGCGCAGCGGCGGCGCCGAGAAGACGAGGATTTGGGGATT
TTTGGCAGGGAGGCGGCGAGGATGTCTAGGCGGTGGCTGGTGTGGTG