Detailed information on CNT30115713


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000696, E-value = 2e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690629Oryza nivaraOryza sativa56.1355.2299.16238forward

Expression of CNT30115713

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKLFVSCGLMLASYFTAFTFTRPPPCLQETMGDPSFFSLFSFTNQIKTWIKVI*

>peptide 2 (39 aa)
MTNLWVADETFCQLRIDASILLHCFHLYKTTTLLARNHG*

Sequence

>CNT30115713
GTGGATTTACATTGGAGTTGCATTTTATTCAGGCATGAGGGGGGAAAAATGGCAGTTAAATTAGTTACAGGTTGATAGGAAATGGAGAGATTATTACAGT
TTATTTTTTTTCTTTGATGACAAATTTATGGGTGGCTGATGAAACTTTTTGTCAGTTGCGGATTGATGCTAGCATCTTACTTCACTGCTTTCACCTTTAC
AAGACCACCACCTTGCTTGCAAGAAACCATGGGTGATCCTTCTTTCTTTTCTCTTTTTTCTTTCACCAATCAGATCAAAACCTGGATCAAAGTTATCTAA
CTCTTCAGGAAATAAGGTCATTTTCATAGTCGGCAGATTTGCAGTATCTCTAACGAATTCGCATCAGATTGGATGCACATCTTATGCTGAATCCCTTTAC
TCTCTTGTGTCCTAACAAGGTTTT