Detailed information on CNT30114308


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201967Ficus caricaPisum sativum5.1143.597.787forward
CNT3079268Ficus caricaBrassica juncea5.735.7998.9797forward
CNT30679330Ficus caricaTriticum urartu12.8646.7994.52219forward
CNT3038653Ficus caricaCucumis melo12.8622.0594.52219forward

Expression of CNT30114308

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLCHSTWSYETGMHPGSRDSFIEFQQFLPLLRSPQERKKNR*

>peptide 2 (41 aa)
MIVSGTHGLTLSLNIYTQICIGAVMIFIGYMYWGGDDIYRL*

>peptide 3 (44 aa)
MPQVKDHHFAAFAKELDRVSRLAYQIQQPDRLWRMEGVVGRRCL*

>peptide 4 (44 aa)
MAALFVLFLYDCKRNPRSHSLSKYIYTNMYWGGDDIYRLYVLGR*

>peptide 5 (34 aa)
MNWWIMTVLLLSTWRLVVCGSHGIGGIPSLSHFV*

>peptide 6 (37 aa)
MAVGGLWQPWYRRHPLSLSFCLRNGKSEPLILFRKPF*

>peptide 7 (60 aa)
MSLTWKGGSGAWDFMWDQAEQRTRLLDLYLCMGIVQSANPKQSYIRRFMSEKSKLRWWYN*

>peptide 8 (47 aa)
MAFLNITHIFVAILQMRFCSQGHPADYGLVVVLSVTTMAAYFCYASL*

Sequence

>CNT30114308
TCTATTTCAACTAAACATAGCATAACTTTGTGGCTTTGCTCTCAAGGAGATTCAAGAGATTAGGGCCTGGTCGTTGTCCTTTCTGTAACAATGGCTGCTT
TATTTGTTTTGTTTCTCTATGATTGTAAGCGGAACCCACGGTCTCACTCTCTCTCTAAATATATATACACAAATATGTATTGGGGCGGTGATGATATTTA
TAGGCTATATGTATTGGGGCGGTGATGATATTTATAGGCTGTAAAACTTAGGCATTGTGTGGGGAAAGAAGAGCATCCAGTTATCGGTTCGTCGACCCGG
ATGAATTGGTGGATAATGACGGTTCTGTTGCTTTCCACATGGCGGTTGGTGGTCTGTGGCAGCCATGGTATCGGCGGCATCCCCTCTCTCTCTCATTTTG
TCTAAGAAATGGCAAATCTGAGCCTTTGATTCTCTTTCGAAAACCTTTTTAGCAAATTAGGATTAGGAGTATATTTCGCCCCTATTTGAACCTTAGTATG
ACAAAAATCAAGTTGAGGCATGGTTTTGTGGCATTCTTGTAAAGCTACCTTTCTTTTGGAATGAGGTTTTGCTCTCATGGAGACCCAGCAAATTATTGTT
CGCTAGCTTCTCTCTGATCGTAGCAAAACCGATGATTCAAAAATAAAAAATAAAATAAAAAAAAATCCAATAAATATAAAAATCGTTGTTTCCAGATACG
GTTGCCGGTTGACATCTCTTCTAATTTGTCGATAGAAGCAAATTGTTGTGTGGAGCAATCAATATCTTGACATAAGCCAAGGGGCAGATGTTGTGCCACT
CCACCTGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGAGACTCTTTCATAGAATTCCAACAATTTCTCCCGCTCCTCAGAAGCCCACAGGAACGGAA
GAAGAATAGGTGAAGGGGTATTTTTGTTAATTTATTATTATTTATTTTTTAACTATTTCATAAAATAAAATTAAATGACACAAATATAAACGTTAATGTT
ATGGTAGGCACAATAAGGAGTCATGTTTTGACTTCCTCCTCATAATTGCATAAATAGAAGGTGTCAAATTATGGCATTCTTGAATATAACCCATATATTT
GTGGCAATCTTGCAAATGAGGTTTTGCTCTCAGGGACATCCAGCAGATTACGGCTTGGTCGTTGTCCTTTCTGTAACAACAATGGCTGCCTATTTCTGCT
ATGCTTCTCTTTGATCAATCAAAAGCTTGTCTTAATGCCACAAGTGAAAGACCATCATTTTGCAGCATTTGCTAAAGAGCTTGACCGAGTTTCACGGCTG
GCATATCAGATTCAGCAGCCTGATAGACTGTGGCGAATGGAGGGGGTGGTGGGTCGACGATGTCTCTAACATGGAAAGGAGGTTCTGGTGCCTGGGATTT
CATGTGGGATCAAGCTGAGCAGAGAACTAGGCTTTTGGATCTGTATCTGTGCATGGGCATCGTGCAAAGCGCAAACCCGAAGCAAAGCTATATCAGGCGT
TTCATGTCTGAAAAAAGTAAACTAAGATGGTGGTATAACTAATTGAAGGAAAAGAAAAATAATGGCCAAGTCTTCCTCCAAGTAAGATGCTATAACACGA
TGTAAGAATGCTGAAACATGAGTTTAGCAGGCAAGTTTTGATCAGATCATATGTTGCTTTATATGAATGTTTTTGACATTACTCGGTTAAATCGTATTCA
GAA