Detailed information on CNT30113527


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690387Ficus caricaOryza sativa21.674.0386.1565forward

Expression of CNT30113527

Peptides detected in this lncRNA

>peptide 1 (39 aa)
YSYTRCKRIGTACCSSFKCCAAPILFTSSGVPAAPSPIL*

>peptide 2 (30 aa)
MVALYTLLFPWTASIPYNIGMPRRVDKAPS*

Sequence

>CNT30113527
TACAGCTATACAAGGTGCAAAAGAATAGGGACTGCCTGTTGCTCTAGTTTCAAGTGCTGTGCTGCTCCAATCCTCTTTACAAGTTCGGGGGTCCCTGCAG
CACCTAGCCCAATATTGTGAGGAAAGATGGTCGCATTGTATACATTGTTGTTTCCATGGACAGCATCAATCCCATACAACATAGGAATGCCGAGGCGAGT
AGATAAAGCGCCCTCTTGAAGTCATTCACCATCTTAATCCATGTCTCTGGTGAAGCCTCATTAGCTGGAACACTTCCTCCCCCCACTTAATACACTGCCT