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Detailed information on CNT30111294


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697749Oryza longistaminataOryza sativa13.1324.1696.9265forward

Expression of CNT30111294

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MRDSAAVCCDSRGGPVIAYRFMVNPRRQIQQTSTTNGGSGVAYGGPSVAAHQRYCSASAVSSPMSPPSKVWICCFIGNLDF*

>peptide 2 (63 aa)
MEDQAWLPIRGTALHLQFPHQCRRPPRYGFAALLAILTFNSSTMNYRSSGEIIGLMGEKDRLF*

Sequence

>CNT30111294
TTCTTTTGTTTTCGAAATTACTATCAGAAAAAAATGCACATGCTCATGTAGCTCTCTCTCGCCAAGAACACTGCTCTAACTGATTAAATGTTTTCAGACA
TGACCAGTCACTGAAGAAAGGTGGAGAGAGGTTCTTCTTCTGTTACATGCGCGATTCCGCCGCAGTTTGTTGCGATTCACGGGGTGGACCAGTCATTGCC
TATAGGTTCATGGTGAACCCACGGCGGCAGATCCAGCAGACCAGCACCACTAACGGAGGATCTGGTGTAGCGTATGGAGGACCAAGCGTGGCTGCCCATC
AGAGGTACTGCTCTGCATCTGCAGTTTCCTCACCAATGTCGCCGCCCTCCAAGGTATGGATTTGCTGCTTTATTGGCAATCTTGACTTTTAATTCCTCTA
CAATGAACTACAGAAGTTCAGGAGAAATAATTGGTCTAATGGGTGAGAAAGATAGGTTATTCTGATTTGCACTCACCTGAGTAAGTTGTTATCAC