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Detailed information on CNT30110112


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103061Oryza longistaminataOryza rufipogon10025.998.73237forward
CNT30577244Oryza longistaminataOryza barthii36.2914.1294.1986forward

Expression of CNT30110112

Peptides detected in this lncRNA

>peptide 1 (51 aa)
EVDKLMNSFQVYFNMLVDMSSVGTLQEPMLMFMKKSEWRRQKNSMCGAGSS*

Sequence

>CNT30110112
GAGGTTGACAAGTTGATGAACAGCTTCCAAGTGTACTTCAATATGCTTGTAGATATGAGTTCTGTTGGCACATTGCAAGAACCGATGCTCATGTTCATGA
AGAAAAGCGAGTGGAGGAGACAGAAAAACTCTATGTGCGGCGCCGGCTCATCCTAATTGATTACCTGGTATTCTCCGGCACGCTCTGCAGCAAGGTGGCC
TCCTTCTCCACCAGCGTCGAGATGCCGGCGATCAAAC