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Detailed information on CNT30108941


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006488, E-value = 3e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103901Oryza longistaminataOryza rufipogon33.997.7395.3586reverse complement

Expression of CNT30108941

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLRIKVIYGFYYSFTLLLFIYLYLFTFNYL*

Sequence

>CNT30108941
GTACTCCCGGTTCTGGAGTTGTGTCATCAGGGTGATTCCTACTCCTAAAGTATAAGTAGTTTTAAAATTAAAATGTTGAGGATAAAGGTGATTTATGGTT
TTTATTATTCCTTTACTTTATTATTGTTTATTTATTTATATCTATTCACCTTTAATTATTTATAATATGTCTTGCTGAGTACATAAGTACTCACCCTTGC
ATAATTTGACATATAGAGGAAACGTGCTAACAAGGAGATCGGAAGGAAGCGAG