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Detailed information on CNT30108786


BLAST search results

BLAST vs Swiss-Prot:
sp|A2XF66|H2B1_ORYSI, E-value = 9e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693801Oryza longistaminataOryza sativa2.8734.7798.9797forward
CNT30674495Oryza longistaminataSetaria viridis8.3674.6790.11283forward
CNT30523132Oryza longistaminataSetaria italica10.2558.1288.47347forward
CNT30526697Oryza longistaminataPhaseolus vulgaris2.2228.528875forward
CNT30630561Oryza longistaminataVigna unguiculata2.1330.3886.1172forward
CNT30178569Oryza longistaminataSecale cereale8.9546.8385.48303forward
CNT30291556Oryza longistaminataTriticum aestivum2.934.2795.9298forward
CNT30226219Oryza longistaminataHordeum vulgare2.8441.0397.9296forward
CNT30383318Oryza longistaminataTriticum turgidum6.2422.9682.94211forward
CNT30586986Oryza longistaminataMusa acuminata2.8727.493.8197forward
CNT30553215Oryza longistaminataOryza glaberrima15.9691.8495.19540forward
CNT30171046Oryza longistaminataTrifolium pratense2.1920.8589.1974forward
CNT30435745Oryza longistaminataAegilops tauschii5.4136.0990.71183forward
CNT30244373Oryza longistaminataAvena sativa7.7750.9785.55263forward
CNT30666604Oryza longistaminataTriticum dicoccoides5.5335.4884.49187forward
CNT30455629Oryza longistaminataSaccharum spontaneum7.5129.683.86254forward
CNT30131583Oryza longistaminataLolium perenne2.6621.2397.7890forward
CNT303693Oryza longistaminataZea mays3.0129.5794.12102forward
CNT3066775Oryza longistaminataLeersia perrieri2.925.5297.9698forward
CNT30205622Oryza longistaminataHelianthus annuus2.2528.1590.7976forward
CNT30681751Oryza longistaminataTriticum urartu7.4540.1984.92252forward
CNT30721099Oryza longistaminataTriticum spelta3.0122.6294.12102forward
CNT30346527Oryza longistaminataEragrostis tef1.6827.0192.9857forward
CNT30363844Oryza longistaminataSorghum bicolor10.2543.786.17347forward
CNT30369945Oryza longistaminataOryza glumipatula8.2440.0998.21279forward
CNT30324987Oryza longistaminataAsparagus officinalis2.9826.6596.04101forward
CNT30100952Oryza longistaminataOryza rufipogon13.3610098.01452reverse complement
CNT30575689Oryza longistaminataOryza barthii8.3976.7697.89284forward
CNT30496069Oryza longistaminataDigitaria exilis5.6423.9387.43191forward
CNT30557628Oryza longistaminataPanicum hallii7.7747.2283.65263forward

Expression of CNT30108786

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPRLQTCNTLYLEIRYISFAGKLSFSFSTPGKCLS*

>peptide 2 (33 aa)
MLFANQYWAQQKSQNYAFRPGEVLIGLVGTEPD*

>peptide 3 (33 aa)
MFLTEGNKPHSLVHMVLQKKAAKSLLHMIFTVN*

>peptide 4 (50 aa)
MFKLYEQATSKHDRTSGQSTKNITCMALACTNSRISTDNLCVLLMVHVNK*

>peptide 5 (61 aa)
MQLCQDYKHATHYILKLGTSVLQANCPFHSVLQVSASANVVVCKESNQRRDQFCSQLVLFI*

>peptide 6 (91 aa)
MEMNLLLTNISVLKGLAPTIREAKTASRPPRSIISSNPRSPNRNRKEKKTQDANQPPTINNTRHVYYFKSKPPIKIKHNLQSRRKFATTAT*

>peptide 7 (39 aa)
MYEYALRQENCSSSATMVIDYALCSFILLQFPQKLVFHE*

>peptide 8 (40 aa)
TVGIVPIFGLEGFYTRIELITAKFLYRKEPFTYPRLISAF*

Sequence

>CNT30108786
GCACAGTTGGAATCGTCCCCATATTTGGACTGGAGGGATTTTATACAAGAATTGAACTAATTACTGCAAAATTCCTATATAGAAAGGAGCCCTTTACCTA
TCCTAGGTTAATCAGTGCATTCTAATTGATTTAATTGAACTAAAGTGAGATAATCCAACTTTAGCCATGCCCATGGAACTATAACCTCTTAGGTAATGTG
TTCACAGGTCCGCATGTCAATGATCACGTTACTCTGACGTAGGGTACAAAGCCATCCAAAACCAGTTCATCGGATATACATCACTGCTTTAATACTTTTG
AGATCAACTTCAAACAATATCGCTTTATAGACACAGAAGAAAACGGTGGAAGAAATAGCTAGTGGAGCAGGGGCGGGTATATGGGTCATCCAGCATTCTA
CGCATATATAACCTTCCAGCCCGGGTTCATAAATTCAACCTAACCTTCCAACAACAATTTTCCTGTTTGAAAGCTTTCTCTGTCTTAAAAAAAAAACAAA
CAATGTTGTTCGCAAACCAATACTGGGCTCAACAAAAGTCACAAAATTACGCATTCAGGCCAGGAGAAGTGCTCATAGGTCTTGTTGGAACTGAGCCAGA
TTAGCCATGTACGAGTACGCTTTAAGGCAGGAAAACTGCTCCAGTTCAGCAACAATGGTGATAGACTATGCCCTATGCAGCTTTATTCTTTTGCAATTTC
CACAAAAATTAGTCTTCCACGAATGATCTGCCAAAGAAAGGATTTATTGAAAGTTTAGTCTTACAATAAAACAGACTAATCAGGGGAAAAAAGAAAGCTG
GTTTAGTATAAATCTATGCTGAATACGAATAATTTCCACATGAAGAAAGATCTGAATGAATCCCAAAATAAAAGCATTCTGCAGTGACAAAAATGGTGGA
GGGCCAACATGCTAGCAAGATGGATATCTAATCTCAAAGTTTATGGCCAATCTAGTAGATATTTTCTTTGGGATTAACAGAATAAAAAGAACTATATAAG
CAACACAATGTTCCTCACAGAAGGAAATAAACCACACAGTTTGGTCCACATGGTTTTACAGAAAAAGGCAGCAAAAAGTTTGCTTCACATGATTTTTACA
GTAAACTAGCCAAGTTCTCAATCTGGGTTGAACGTAAAATACTATAAATCCCTACTTAGTGTCTCGATCTCATAGAACTACAAAAATTAGTTCTGTTCCA
CACCATGCAGTTATGCCAAGATTACAAACATGCAACACATTATATCTTGAAATTAGGTACATCAGTTTTGCAGGCAAATTGTCCTTTTCATTCAGTACTC
CAGGTAAGTGCCTCAGCTAATGTAGTTGTTTGTAAAGAGTCTAATCAGCGGAGAGATCAGTTCTGCAGTCAACTTGTCCTTTTCATTTAGTTGTCCAGGT
AAGTACCTCATCTAATTTAGTTGTTTGTATCAGTGGATTTTTTTTATCCCCTTAGTATCTGAAGTAGATCAGAGATAACATCACAAATGAGGTCCACTCA
ATCTATGAGGGTAGGTGTTATCATGAATCACAATAAACCACTCTAGGCTTCAAGTAATTAAGCTAGAAATGTGTGTGTCGTGTGCATGTACCTTCAATTC
CAATTGAAAACCAGGTAGAAAGTACTATATACAGATTTTCAGAACTCTTCTCAGATAAAGAAGAATCAAAACTAACATCAGAGGTAAATTGCGGGTCATA
GGCAAGATAGGGGATGAGCAGAGCAAATACCCGTCCATCCATTTCCTTAACAGCTTTCTCTGCGTCTGCTTGAGAAGAATATTTAACAAAACCAAATCCC
TTTGGCCTTCCAGTTTGGTTGTCTCTCACCAATCGAGCTACGCTTGATAAGGTAGATAAAGCAGAGTGAAACTTGAATGCCAATTAAGAGCAACAACAAN
NNNNNNNNNAAATTGCCTGTGCTGAAAAGCATGTGACTACTGAGTACTGACTGGTACCTTCCTCAACAGCGCCAAATGGTGAGAAGACATTTTTAAGTTC
TTCCTCTGTTGTGTAAAATGATAGCCCTACAAAATCCCAAAATGAGTGAATGAATGTTTAAGCTGTATGAGCAAGCAACATCAAAACATGATAGAACGAG
TGGACAATCCACTAAGAACATAACTTGCATGGCTTTAGCGTGCACAAATAGCAGAATATCTACAGACAACTTATGTGTTCTACTCATGGTCCATGTGAAC
AAGTGAGCATCTCACAGGCTCAGCAGATTAGGGACTTCTAAGTACGCTATCACCAAGAGAATAAATCAGCATCTGTCAAACTCTATGAGCTCTACAACAA
CAGCTAGCTAGTATGTATCTAGGCTGTAATTCTCTAACCCGCTAGAAAGCATCCTCTGATCGATCCTTCATTGCAATCAAAAGGAATCATATTCTGAAAG
CACCAAGCCTCAACAACTTAAGGCATGCCATAGCTATCATATTCAGAAAAAAAGAAGGGCTAAAGGACACACCATTTAGTGCTCATTTCATCCACCACAC
CCCCCAGAATCACACCAGATCAAGAAACTGCATTCACTCATGAAGTTCTGACGCACAGATCGTCACAAGCGGAACTGTGAAGCAGCAGGACATCACATCA
CATCACAGGCTCACACAGATCCAAACATTTTGCAGCAAACCACAAGCACGTAGGCGGCGAAAATTTAATTACATGGAGATGAACTTACTGCTCACAAATA
TCTCCGTGCTGAAAGGCTTGGCTCCAACCATCCGAGAGGCCAAGACAGCCAGCCGCCCACCTCGCAGCATCATCTCCTCAAACCCTAGATCCCCAAATCG
CAATCGCAAAGAGAAAAAAACACAAGATGCTAATCAGCCACCGACAATAAATAACACTCGACACGTCTATTACTTCAAATCCAAGCCGCCCATTAAGATC
AAGCACAATTTACAAAGCAGGCGCAAGTTTGCAACTACTGCCACCTAGCACACTGCACACACGAGAGGGGAAAGGGAAGGAGAGAAGCATGGCAGCGAAA
CCCTAGAGAGACAGGCCTAGTTGCTGGTGAACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGAC
GGAGGTCTGGATCTCGCGGGAGGAGATTCCGATGTCCGGGTGCACCTGCTTCAGGACCTTGAAGATGTAGATCTTGTAGGTCTCGACGCTCTTCTTCGCC
TTCTTCCTCCCCTTCTTGTCGCCGGCGCCGCCCTCCTTGGACGACGCCTTCGACGCCGGCAGCCGCTTCTCCGCCTTGGGCTTCTTCCCCGCCGGCGCCT
TCTCCGCCGACTTCTCCTCGCCGGCTGCGGGCTTCTTCTCCGCCGGCTTCTTCTCTGCCTTGGGCGCCATCGTAGCTTCCTCTC