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Detailed information on CNT30108723


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30587177Oryza longistaminataMusa acuminata6.7921.0486.9669forward
CNT30370044Oryza longistaminataOryza glumipatula64.3743.4893.73654forward
CNT30603969Oryza longistaminataOryza punctata32.8725.2594.91334forward

Expression of CNT30108723

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MISCVPASFVYKLSSMVFGGLNIALLVVLRIVDAAALHFTYRKSASDKRDYYLCDLLIDILPL*

>peptide 2 (62 aa)
EGLCFSILILEEFSDGTLKNLQGFMAIPMIFLQVVQLLSQACCLPLPELLDMKTESRNAESR*

>peptide 3 (32 aa)
MRAVMGWFSSEAFYFNEIQKHFDGMRTVRLTI*

Sequence

>CNT30108723
ATGAAGGTTTATGTTTTTCTATCTTGATTCTTGAGGAATTTTCTGATGGAACATTGAAAAACTTGCAGGGTTTTATGGCCATACCGATGATTTTCTTGCA
AGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTATTGGATATGAAAACAGAGTCAAGAAATGCCGAATCCAGATAAGACGATGAG
CTACCAGCTCTATTGAATTTGGTACTCCATTATTGGTCCTCGTTTTGCGGGGTGTTACTCCCGTATTGTAAAAAGCTTGTTTGTCTAAGCAAAATGCTTC
CAAGTCCTACCAAAGCTAGATTAACTACAAAGTATCTGCAGAGTGCACAAGTCAGGTAAAAAACTTGTTTGTCTAAGCAAAATGCTCCCAAGTCCCACCA
AGCTAGATTAACTACAAAGTATCTGCAGAGTGCACAAGTCAGGTAAGTGATGATTATATATCATCCTGGTACAAGCTTTATTGCGGTGAAAGATAAGCAG
TTAGTCTGAAATCTGTACAGATCTGTCAGCTGTTACCGAAGCAAAAGGTTCAATGTAACTTAAAGGATGCAGTACTGATCCTTTTTAGTGGATTTAACAC
AGATTTAACAGGGTGTTCTGTATGCGAGCTGTGATGGGATGGTTCTCTTCAGAAGCATTTTATTTTAACGAAATTCAGAAGCATTTCGATGGCATGAGGA
CTGTTCGATTGACAATTTGACGCAGCTTAGGAATTGGACCATGATTAGTTGTGTACCTGCAAGTTTTGTATACAAATTATCCTCAATGGTTTTCGGTGGA
TTGAATATTGCCCTTTTGGTTGTTTTGCGCATCGTTGATGCGGCTGCTCTACATTTTACTTATAGGAAATCAGCTTCAGATAAAAGGGATTATTATCTGT
GTGATCTACTGATCGATATTTTACCTCTCTAGCTGAGTTTGTTAAGCCAATTGATTATCGAGTGGGATCCTCTCAGCGACGCATGAGCATGAGCATCCGG
CTATTTGTTGATTGAG