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Detailed information on CNT30108687


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09020|PR4_PHAVU, E-value = 6e-07

BLAST vs NONCODE:
NONORUT002251, E-value = 4e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3065513Oryza longistaminataSelaginella moellendorffii9.220.793.6247reverse complement

Expression of CNT30108687

Peptides detected in this lncRNA

>peptide 1 (32 aa)
FLFQWENCLLALRKWKSKSQRSRGPRPVRTSL*

>peptide 2 (36 aa)
FSFSMGKLSVGTKKMEEQKPKEQRPKASENKPVMNE*

>peptide 3 (53 aa)
MREMEWDVALRLMVQVPGKVNLVQTSAYKNVGAGKLNLFSYKRITSHFRRCAV*

Sequence

>CNT30108687
GTTTTCTTTTTCAATGGGAAAATTGTCTGTTGGCACTAAGAAAATGGAAGAGCAAAAGCCAAAGGAGCAGAGGCCCAAGGCCAGTGAGAACAAGCCTGTG
ATGAATGAATGAAGGCTTTCTGATGTGTTTGGTCCTTACAAGGAATAGGCTTCAATCATGTGATTCCTAGTATGTTTCTGTACTGGTTCTGTTTAAGTGA
GTTTGATGTGAACCATGTCTGGAACATCTGAGAACTTCCCAGCTATCAAGTTTCTTTAATTTAGCTGATAATTTTCATGCGTGAGATGGAATGGGATGTT
GCTTTGAGATTGATGGTTCAAGTTCCCGGTAAAGTTAATCTTGTCCAAACTTCGGCATATAAAAATGTCGGTGCTGGCAAGTTGAACTTGTTTAGTTACA
AGAGAATAACATCTCATTTTCGTCGTTGTGCTGTCTAATTCAACATCCAGCGGTTATATATGGACAAAATATTATGTGCTACTCCTACCACTTCTTTAAA
AAATTAATGGG