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Detailed information on CNT30108101


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000877, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690897Oryza longistaminataOryza sativa100.4245.7595.36474forward
CNT30555143Oryza longistaminataOryza glaberrima74.1596.4296.57350forward
CNT30596034Oryza longistaminataOryza meridionalis71.8259.5896.46339forward
CNT30369613Oryza longistaminataOryza glumipatula87.0837.8597.57411forward
CNT30100112Oryza longistaminataOryza rufipogon97.6799.3595.01461forward
CNT30574816Oryza longistaminataOryza barthii85.8123.7493.33405forward
CNT30117307Oryza longistaminataOryza nivara86.2331.0796.07407forward
CNT30604423Oryza longistaminataOryza punctata40.6814.1884.9192forward

Expression of CNT30108101

Sequence

>CNT30108101
CTAGATAATTGCATAATCGGTGAAGAAGTGGATTAGGTGCTAACAATTCTCTGATCAAGGTTTAGTCTTAGTCTTTGAGTGATGCGGGTTCCGATTGCTT
CTTCTAGGATGAGAACTTAATGGGGTAAACCCCTAGTCGGTGTGCTTGTGATTGGGTAGTCAAGCTTCCGCTGTTCTCTAATAAGTCTATTTGGCCGGTC
GGCCTATGTAATTATTAAGTTGTTGTAAGTCTTAAGTTTCTTTCATCTTAGTTGTGTTTGCTATGTATAATCATGCTTAAGATGAAAGTGTGAATCTAGT
GCACATCCTGGGAACTAGATTCACATGAGTATGAGTTAGGAATATTTGAGAGGTTGTAGATCTTTAGCCATTTTTGTCAAGTCTCCTGAATGTGTAACAC
ATCTGGTCGCCGCCTTCGAGTGGTTTGACGGGCACATCTCAGGCTGAAGTTGACTGGCAGGCTAAGGGCCCA