Detailed information on CNT30107095


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001124, E-value = 5e-126

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695887Oryza longistaminataOryza sativa75.1270.896.75308forward
CNT30552045Oryza longistaminataOryza glaberrima53.6662.593.18220forward
CNT30370076Oryza longistaminataOryza glumipatula70.7397.9793.1290forward
CNT30117152Oryza longistaminataOryza nivara24.6322.3997.03101forward

Expression of CNT30107095

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MPVEWSRHSCSVVCFSFIFRCVECFSLRGTIHLCNNLLFANIK*

>peptide 2 (38 aa)
ATSYGHLYQFLFDIPSINMQKRSISAKVMTWRIKLVLG*

Sequence

>CNT30107095
CAGCCACATCATATGGTCATCTTTACCAGTTCTTGTTTGACATTCCTTCTATAAACATGCAGAAGAGGAGTATCTCAGCGAAGGTGATGACCTGGAGGAT
TAAGCTTGTTCTTGGTTAAGATGCCTGTGGAGTGGAGTCGCCATAGCTGTTCCGTAGTTTGCTTTAGTTTTATTTTCCGCTGCGTAGAATGTTTTTCTTT
GAGAGGAACTATCCACCTCTGTAATAATTTATTATTTGCGAATATTAAATAGTTATTTATTTGTACTCTATTATCAATTTGTTATTCTGTGCCTCGGCTG
ATTCCTGGACGAGGGTTTAACACACATGTAAGCGTTTGGAATTTTGGATAGAAATTCCGGGCGTGACATAAATTGTCTTTGCCAGCTAGAAATTGATGTG
TAGATTATGG