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Detailed information on CNT30106960


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100748Oryza longistaminataOryza rufipogon79.3982.3798.25285reverse complement
CNT30603819Oryza longistaminataOryza punctata86.35102.3190.97310reverse complement

Expression of CNT30106960

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MRWMMPPVLVGSNEYLSKMVFCNDLMIEMRDCILVMLLHHCYLKNQT*

Sequence

>CNT30106960
GTAGGCGCCGCTGGCACGCGGCGCCTCGTAGCTGTACATATGTGCAGTAGTAATACCAGTATACTGCTGTAATTACAGCAGTACAATTTACTATTACTAC
TCCATTTTTATTAGGAAAATCAGCGGTAAATTCTCAGTGTGTAGCTGAGAATTATGAGATGGATGATGCCCCCTGTATTAGTGGGGTCAAATGAGTATTT
GTCAAAAATGGTATTTTGTAATGATCTTATGATCGAGATGAGAGATTGTATTCTAGTGATGCTATTGCATCATTGCTACCTCAAGAATCAAACATGAGAC
GTGTACCCCAATAATTCTTTTGTCCATGACATTGCAATGCTTATACGATGATGATTGAT