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Detailed information on CNT30106739


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006322, E-value = 9e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577075Oryza longistaminataOryza barthii75.7825.196.91194forward

Expression of CNT30106739

Peptides detected in this lncRNA

>peptide 1 (44 aa)
VWRVPTLEELSRSIEGVKVPNDIDRHGTGVAPLDYTLLLHTTEI*

Sequence

>CNT30106739
AGGTGTGGAGGGTTCCAACGTTGGAGGAGTTAAGTCGAAGTATCGAAGGAGTTAAGGTACCTAATGATATTGATCGGCATGGGACGGGAGTAGCACCTTT
GGACTACACATTATTGTTGCACACTACTGAAATTTAGTTTTAGACTATGTTTCTGCTTAGTATAAGTTTTGTGTAGAACTTGTAAAGGTCATTTAAAGTT
CCGGTCCATAGTTTCACGGGGAATTCATGGAGCTAGGATGGTTTGGATTGTGTGGG