Detailed information on CNT30106324


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695723Oryza longistaminataOryza sativa12.4253.0799.5199forward
CNT30554718Oryza longistaminataOryza glaberrima29.2163.5100468forward

Expression of CNT30106324

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKNEGEVVNSSSKAVALLEFGAFDDQFKQIQLLPWLQN*

>peptide 2 (32 aa)
MLHILECQIRNNGGSIGSNHKHDHEGISDIRL*

>peptide 3 (50 aa)
MVVSLLPAIRIKRFLAHNYLNWSSLFSIHKLISNYIVCFFYLTIHVHGVI*

>peptide 4 (41 aa)
MLISKMFCHKQQNFRPDHYFKVSHVYPTNMIFMRKALCDLD*

>peptide 5 (30 aa)
MISSSRYSCSLGCKTNYSLCSFLFDIINFF*

>peptide 6 (55 aa)
VRPISMMDKFLQSCKPAVMRKLQLSSRLLHVAEQDISSKGVVNMPKRGGCIIKVE*

>peptide 7 (55 aa)
MMFPESNYYHPQSMVVVAIWNCCQNYQVNNPCLIITRSDTSERSSTQMQQVNQWS*

Sequence

>CNT30106324
GTAAGACCTATCTCCATGATGGACAAATTCTTGCAAAGTTGCAAGCCTGCAGTTATGAGGAAATTGCAACTTTCAAGTAGGCTACTGCATGTAGCAGAAC
AAGATATATCTTCTAAGGGAGTGGTCAATATGCCCAAAAGAGGTGGATGCATAATTAAGGTTGAATGAGTGATGGGTGGTTTGGTGCTTAAATTAAAAGA
TTAGGTATACACAGAGGTTGCTGACTTAAGAAATACTCAGAAGCAGCATAATTTTCAGTATGAATATGGAGTTCGAGCTAGCAACTTCTTCTGCATAGTA
GATTATGCTAATAAGCAAGATGTTTTGCCACAAACAACAGAACTTCAGACCAGATCATTATTTCAAAGTTTCCCATGTTTATCCAACGAATATGATTTTT
ATGAGAAAAGCTTTGTGTGATCTTGACTGAAAAGAGCAACTGGTGCTGATATGAAGAATGAAGGAGAGGTAGTCAACAGTTCCAGCAAAGCTGTTGCTTT
GTTAGAGTTTGGTGCATTTGATGATCAGTTCAAGCAGATACAGTTGCTCCCTTGGTTGCAAAACTAACTACTCACTCTGTTCATTTTTATTTGATATTAT
TAACTTTTTTTAAGCCTCTGAGATGTAACTTTGACTGTATCTTTTTTATAACTTTATTGTATTATTATAGTAAAATGAAAAATATTGTGAACATATTTTC
AGTGACAAATCTAGCCTATTTAGAACAGTTCTTAACCCAGTCTAGATTATTTTAAAACCATTGATGGTCAAACTTTAGGATGCTACATATTCTGGAATGC
CAAATAAGAAATAATGGAGGGAGTATTGGAAGCAATCATAAACATGATCATGAAGGTATAAGCGACATAAGACTGTAAATTATCGATATCTTGTGAAAGT
TGGTATTTCAATTTGAAATATGTCATGTTGATGATTCTTGGTGATGTCTAATAACCAAACATTCCTGTCTCAAACTTGTTAGAATTTCTCAACTTCTGTT
TTGTCCTATCCAGGATTCCAGATTGGGATATGGTTGTTAGTCTACTACCTGCAATAAGAATCAAAAGATTCCTTGCTCACAACTATTTGAACTGGTCATC
ATTGTTTTCTATCCACAAACTTATCAGCAACTACATTGTTTGTTTTTTTTATTTGACCATTCATGTTCATGGAGTGATCTGAGTTCAATTTCTAGGCACT
GGTAGTATCAACTGTATCTTGCAGGATAATGTTTTTAGCATTCGATTATGGAAATGAGTAAAAAAAACTCCAATGTATTAAATTGCTGCTAAATGTAAAC
TCTGATTGTGCTGGTTATTTTTTATGCAGATACACTATTAGTTAATCAAGTTCTATTGTGATCTCTACAAAGAAGTATGGTCTTCCAGACAAATAAGTTC
CTGTGTCATCCATGATGTTTCCAGAGAGCAATTATTATCATCCACAAAGCATGGTGGTAGTTGCCATTTGGAACTGCTGTCAGAATTACCAAGTCAATAA
CCCATGCTTGATTATTACAAGAAGTGATACCAGTGAAAGATCAAGTACACAAATGCAGCAGGTAAATCAGTGGTCATAGAATCATATAGAGCCAGGAACA
AG