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Detailed information on CNT30105825


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005806, E-value = 2e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595702Oryza longistaminataOryza meridionalis26.5520.9891.13124forward

Expression of CNT30105825

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MRRKRRKRKRKGKEEKKKKMTRHVHVACHISAA*

>peptide 2 (29 aa)
MIHFDKFCDLDIHFESLGTYMTQPYKFKDR

Sequence

>CNT30105825
GAGTAAAGTGTATGGGCCGTCCTTAAACTTACTGTGGTGTGTCATCTAGGTCCCAAATCGTCACAACCCCTTCAGGATCCTACGTGGCGTTGATGTGGCA
TGCCACACGGAATGACGTGGCATTATTTTGACTGACAAATGGATCCCATTTAAAATTTTTCCTTTTTCTTTTTTCTTCTCTTTTTTTCCCTTTCTTCTTC
TTTTATGTGACCCGAGCAAAAGAAAGCAAAAAAAGAAGAATGAGAAGAAAACGAAGAAAAAGAAAAAGAAAAGGAAAAGAAGAAAAAAAAAAGAAAATGA
CACGTCACGTCCATGTGGCATGCCATATCAGCGCCGCATAGGATCCTAGAGGGAATGTGTCGATTTGGGACCTAGATGATACACTTTGACAAGTTCTGTG
ATCTAGATATACATTTTGAGAGTTTAGGGACCTATATGACACAACCCTACAAGTTTAAGGACCGCCA