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Detailed information on CNT30105474


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604085Oryza longistaminataOryza punctata30.0149.7788.64220reverse complement

Expression of CNT30105474

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MMNPLLLAKINPLDHSSVEVNDVLLICDTRHLEQPFHIQIWDNLQLQSSDFMPLRRNV*

Sequence

>CNT30105474
ATTTGAGCGGACAGTAAAGAAGTACTAAGCCATGTCAGAGTGTGTTCTGAACTTCTTTGTTGGAAGAGCAGCGAGGTGCTGTGGATGAGGAGCGATTTTA
ATGATGAATCCATTATTGTTGGCTAAGATTAATCCACTCGACCACTCGAGTGTGGAAGTTAATGATGTCCTCTTAATCTGTGACACACGTCACCTGGAAC
AGCCTTTCCACATTCAAATTTGGGACAATTTGCAACTTCAGAGTTCAGACTTCATGCCATTGAGGAGAAACGTGTAGAGGTATTCCGGCTAGTTTCATAA
GGTCATGAGAGAATTATATAGAATCCGGCAGCAGTTTTTTGAGTTGAAAAATTGAACTAGAAATTCCTGGAGAGGCCACCTTTTACGTGAGAGTGAGACA
CGGCGGCGGCGGCAAACCCCGGCAGGCCGGCAAAGCGGCAGCGGCGGCGAGGTCACCTACACCGTCCGATCGGATACGCGCGGTTCAGATTGGGAACAGT
TGAGATTTTAGAGGGAACCAGGTTTATTATTGATGGGAATAATCACATTTCATACTGATACAAAAGAATGGCGACAGCATAAGGCCGTGATACGGTAACA
ACATTTACACTCATACAGGTACATCAGTTTGTGCATTTCTGCCCTGGGACGCTTCTGTCCAAGGCGCGCACCAAATACCTCATCAATTTTCTTCCGTATT
GTTCACTTATTCTGCTTAGAGCAGAAGTTTTCT