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Detailed information on CNT30105132


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603630Oryza longistaminataOryza punctata45.316.2189.37207reverse complement

Expression of CNT30105132

Peptides detected in this lncRNA

>peptide 1 (62 aa)
QLLSVQDDIAATLTCGSHHAESACQPGQQRHVGRNRQQNHRGRRFALVFRDEGGVIPGFPVG*

>peptide 2 (91 aa)
MKEALYPVFRLGDVIHRSARDEGGKMDLFLHIITTQVLERDEYMAHHVPALCGVVVAVIGPWHTRVAKKQGAILDLHVHVRKARREVMVQV*

Sequence

>CNT30105132
CAACTGCTGTCGGTCCAAGATGACATCGCTGCCACACTGACATGTGGGTCCCACCACGCTGAGTCAGCTTGTCAACCGGGTCAACAACGCCACGTCGGAC
GAAACCGCCAGCAAAACCACCGAGGAAGGCGATTTGCTCTGGTTTTCAGAGATGAAGGAGGCGTTATACCCGGTTTTCCGGTTGGGTGATGTTATTCACA
GAAGCGCAAGAGATGAGGGAGGCAAAATGGACTTATTCCTACATATAATCACAACTCAAGTCCTTGAGAGAGATGAATACATGGCGCACCACGTTCCCGC
GCTCTGTGGAGTAGTAGTAGCAGTAATCGGTCCCTGGCACACAAGGGTGGCCAAGAAACAAGGAGCTATCTTGGATTTGCATGTCCATGTCAGAAAAGCT
CGCCGGGAGGTCATGGTCCAGGTATAGCAGTCTGGAGTGCTCGAGGCAGCGGCGGCC