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Detailed information on CNT30104232


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001393, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595962Oryza rufipogonOryza meridionalis38.6133.4799.38322forward

Expression of CNT30104232

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCPWEYVSRSGGTARPTRPACTGVTSGCS*

>peptide 2 (38 aa)
MNEKNYLDETNTSSTAVVIAKVVLLYKFVSQKKRSHKD*

Sequence

>CNT30104232
GACGATCACGCGTGGGCGTGATTCACTTTATGTCAACAGGTAGCGCCGAAAGTTGATAGTGATAACTCGAGCTGCCGCTTTTCATGTGTGCTGTTGTGGA
CTGTGCGCGCTACTGGATATGGCACTACCGTGAAGCGCCGAAAGTGTGATGTTGTGAGCATAAGTTGTGCAAGCACCATATGAATGAAAAGAACTACTTA
GACGAGACAAACACAAGTAGTACTGCAGTAGTAATAGCAAAAGTAGTACTGCTTTACAAGTTTGTAAGCCAAAAGAAACGGTCACATAAGGACTGAAGAG
GTAGAACACTACTGACGAGGCCTCTTACCCCTGTCCCTCCTACCCTGCGCCCTAATGTGCCCCTGGGAGTACGTGAGTCGGTCCGGGGGTACGGCACGGC
CAACCCGTCCTGCCTGTACAGGTGTGACCTCTGGCTGCTCCTGAGTGTGCGCCTTTGGAGCTCCTCCAAGCTGAGAGGAGCCTAGTACGTCCTGGTGGTC
TGCACCGTGCAAGTCGTCGTCGTAGAACTGGCTAGTAGGACCAGTCCTACCGGCGTGAGACGAAGAGGCCCCAGTACCGAAGATCCCGGCTGCAAATCCT
GCTGGACAAGGACCATCAGTTTCATACAGGTATTTAATAGTATTAATAAAAAGTAAAGTACCGTGTGGGCGAGGGATCGACGCTCCGTGAGAGGAAGAGC
TGGCGAACGCGCCCGAAGAGGTGGCGAACGGCCCTGCGGAGCTCGCGGAAGCACCGGTCGTGCCTGCGAACGCGCTCGAAGGCAGACGAGGTCCTGCGAT
GAGGAAACGTGCAGTTAAAACATGGTGACACATT