Detailed information on CNT30104174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696891Oryza rufipogonOryza sativa89.7638.3899.71342reverse complement
CNT30115503Oryza rufipogonOryza nivara76.6444.7993.84292reverse complement

Expression of CNT30104174

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVGFGRGKEGETRKMSSPRRGKPDGARAWFGML*

>peptide 2 (40 aa)
LSFITNKQREGRGGAPALRWMKDCDTGGNTCSQATRTQGG*

Sequence

>CNT30104174
TTCTCTCTTTCATCACGAACAAACAGAGAGAAGGGAGAGGAGGGGCGCCGGCTCTCCGGTGGATGAAAGACTGTGACACCGGCGGCAACACGTGTTCCCA
AGCAACGCGTACTCAGGGAGGGTAGTTTCCGGTACATAGCGTTAGGGAGGTGACCGGAACGGCGGCGGCAAGAGCTTGCTCCGGTAACAAGAGGAGGTGA
CTGTGATGGTTGGTTTCGGAAGGGGAAAGGAAGGGGAAACTAGGAAAATGAGTTCGCCTCGTCGAGGCAAACCCGATGGCGCAAGGGCTTGGTTTGGGAT
GCTCTAGGGATGGAGATCGATCGATGGTGGCCATGGACTAACATGGCCAGGAGAGAGAGAGAAAAGCTCGGTTTGTGTGGG