Detailed information on CNT30104172


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555377Oryza rufipogonOryza glaberrima96.2767.3592.24361forward
CNT30597137Oryza rufipogonOryza meridionalis99.4776.2899.46373forward
CNT30578141Oryza rufipogonOryza barthii99.4775.5192.49373forward

Expression of CNT30104172

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MAATKRMAYSISAVFMLLLIISSTFSSCYAAKDMKDREAIIQRHREECKKTCRERHTYCPPEMPCCCMKNAPASSPSSVKNESGDGLVIN*

Sequence

>CNT30104172
AACTGAAGAGGGCAGATACATACAAACAAGAGCTCAGAGCTTGTTTCTTCAGTGATCTCTCCTAATGGCAGCTACCAAGAGGATGGCTTACTCCATCTCG
GCGGTTTTCATGCTTCTTTTGATCATCTCTTCCACCTTCTCATCCTGCTACGCAGCTAAAGATATGAAGGACCGAGAAGCAATAATACAGCGCCATCGCG
AAGAGTGTAAGAAAACATGCAGAGAACGTCATACTTACTGCCCGCCTGAGATGCCATGCTGCTGCATGAAGAACGCCCCGGCATCATCTCCCAGTAGTGT
CAAGAATGAAAGCGGCGATGGGCTTGTAATTAATTAATTAAATTGATTGATCATCTCCCATCCAAATTTGTAACG