Detailed information on CNT30103753


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001461, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697223Oryza rufipogonOryza sativa55.0547.2897.48278forward
CNT30521236Oryza rufipogonSetaria italica23.768.8785.83120forward
CNT30596997Oryza rufipogonOryza meridionalis10080.896.04505reverse complement

Expression of CNT30103753

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLYSGFHTAFASLALHLKLCREPMVATVPVQHRILP*

>peptide 2 (39 aa)
MVILYALGYNTLILISIEGIWFRCYTLDFILHLHHLHCI*

>peptide 3 (46 aa)
MQLHTLLGVKAGVHIIALHMHLFTLLGVKAGVHIIALHMYILQDVT*

Sequence

>CNT30103753
ATCTGAATCACACTTATTGATTTTACACTGTATATGGTTATACTTTATGCTCTTGGTTATAATACCCTTATACTGATCTCCATCGAAGGAATTTGGTTCC
GATGTTATACTCTGGATTTCATACTGCATTTGCATCACTTGCATTGCATTTGAAGTTATGTCGTGAACCTATGGTTGCGACCGTACCGGTACAACATCGT
ATATTGCCGTAATACGATGCAGCTTCACACCTTGTTGGGTGTGAAGGCAGGAGTACATATCATTGCATTGCATATGCATTTATTCACCCTGTTGGGTGTG
AAAGCAGGAGTACATATCATTGCATTGCATATGTACATATTGCAGGATGTTACGTGAAATATCGATCGAAGATATCTTTGAGAAGTGTTTTCTTCTCTGG
GATTTGTGAGTATATGGATTTGATTGGTGACGTCATGATATTTTTAGTCTATGGATATTCAACTTGTCTTTATGTGAATCATAACTTAGTATTTAATTAA
CTATA