Detailed information on CNT30103539


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005766, E-value = 1e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694340Oryza rufipogonOryza sativa84.8733.9280.87230forward
CNT30369237Oryza rufipogonOryza glumipatula51.2912.7884.17139forward
CNT30109111Oryza rufipogonOryza longistaminata84.1353.1579.39228reverse complement
CNT30577507Oryza rufipogonOryza barthii21.44.493.158reverse complement

Expression of CNT30103539

Peptides detected in this lncRNA

>peptide 1 (39 aa)
XLQRCDEDGEFLKVACRKLETMVMQLYVNYGWIFTNRLE*

Sequence

>CNT30103539
ANAATTACAAAGGTGTGATGAAGATGGAGAGTTTCTGAAAGTTGCATGTCGCAAGTTGGAGACAATGGTTATGCAACTTTATGTCAACTATGGATGGATA
TTCACAAATAGGCTGGAATAAATGTGTTCTCATTATTTTGGCTTTTCCTATTTAAGTGTGTTCTTTTTTATTTGAGCTATACTATTATCTCGAGTGCTAC
TTTGTAATAATTGGCTGTAGCTCTTCTTGAACAAAAGCCGAAATATTATATTCCATTATCTAAAAAAAAAG