Detailed information on CNT30103016


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695434Oryza rufipogonOryza sativa10046.07100299forward
CNT30554764Oryza rufipogonOryza glaberrima10063.0899.33299forward
CNT30577361Oryza rufipogonOryza barthii99.3344.3999.66297forward
CNT30603886Oryza rufipogonOryza punctata10040.4196.66299forward

Expression of CNT30103016

Peptides detected in this lncRNA

>peptide 1 (51 aa)
SPLNFSPLVRLLVSCSAAPTRSTLLQSELSAVRLSSWACSVAQGEKWRCRE*

>peptide 2 (52 aa)
MAMQRVAAEAVEGISVHDIATSTSGGETEGGRGLPRRLAARSRGGSGQTRRLW

>peptide 3 (36 aa)
MTSPHPRVVARRRAAVAFLVGLQRGAVEAAGKLDGCG

Sequence

>CNT30103016
TTCTCCTCTGAACTTTTCCCCTCTCGTGAGACTCCTCGTCTCCTGCTCGGCTGCTCCCACCAGATCCACGCTGCTGCAGTCTGAACTGTCTGCAGTTCGG
CTATCTTCCTGGGCGTGCTCTGTGGCTCAAGGTGAAAAATGGCGATGCAGAGAGTAGCGGCTGAGGCAGTGGAGGGCATATCAGTACATGACATCGCCAC
ATCCACGAGTGGTGGCGAGACGGAGGGCGGCCGTGGCCTTCCTCGTCGGCTTGCAGCGCGGAGCCGTGGAGGCAGCGGGCAAACTCGACGGCTGTGGCA