Detailed information on CNT30102870


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693801Oryza rufipogonOryza sativa19.7629.0310081forward
CNT30188752Oryza rufipogonSecale cereale19.7639.3210081forward
CNT30226219Oryza rufipogonHordeum vulgare19.7634.6210081forward
CNT3066775Oryza rufipogonLeersia perrieri19.7621.0998.7781forward
CNT30577496Oryza rufipogonOryza barthii77.5659.5599.37318forward

Expression of CNT30102870

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MDSLRRKRRENHQTPTTLERLRAGELGDGLGALGDGVLGELAGEDEADGGDGGLLVVPGELGGLTDKLLK

Sequence

>CNT30102870
CACAATTCCACACAAAAATGACGCGAAGAATGATAGTAACAATTTAGCAACCAGAGGTTGCAACCATCACCATTAATTTTAAGATCAGAACTCAACGGGC
ACAACCAAGAGATTCTTACAGTAATCAGCAAGCACTAGACAGGAACACTAGACACAAGAGAAAGAAATCAGAGATCGACAGGGCAACTACCACCGCTGCC
ATGGACTCGCTACGACGAAAACGAAGAGAAAATCACCAAACACCTACTACACTAGAGCGCCTAAGAGCTGGTGAACTTGGTGACGGCCTTGGTGCCCTCG
GAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTGATGGTGGGCTTCTTGTTGTACCGGGCGAGCTTGGCGGCCTCACCGACAA
GCTTCTCAAA