Detailed information on CNT30102674


BLAST search results

BLAST vs Swiss-Prot:
sp|O82246|Y2778_ARATH, E-value = 6e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520677Oryza rufipogonSetaria italica40.0916.0188.1793forward
CNT30386854Oryza rufipogonTriticum turgidum43.979.8891.18102forward
CNT30659942Oryza rufipogonTriticum dicoccoides43.9712.5391.18102forward
CNT30132065Oryza rufipogonLolium perenne43.9713.1193.14102forward
CNT30680595Oryza rufipogonTriticum urartu38.799.5192.2290forward
CNT30596560Oryza rufipogonOryza meridionalis43.5314.45100101forward
CNT30577004Oryza rufipogonOryza barthii43.5316.97100101forward
CNT30117268Oryza rufipogonOryza nivara36.2112.1210084forward

Expression of CNT30102674

Peptides detected in this lncRNA

>peptide 1 (76 aa)
VLLGPVGGGGHGDLRHLREQRQVVERAPGGDGEVSVQLLHRVIHLQFMVTPPLARTHNNFYRASKYLQELAPNSTTS

Sequence

>CNT30102674
GTACTTCTCGGCCCAGTAGGCGGCGGTGGGCACGGCGATCTGCGCCACCTGCGGGAACAGCGGCAGGTTGTTGAGCGAGCGCCAGGTGGAGACGGCGAGG
TGTCGGTCCAGCTCTTGCACCGTGTCATCCACCTGCAATTTATGGTTACACCTCCGTTAGCAAGAACACATAATAATTTCTACCGTGCTTCCAAATACCT
ACAAGAATTAGCACCGAATTCTACCACAAGCA