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Detailed information on CNT30101469

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30596178	Oryza rufipogon	Oryza meridionalis	100	88.39	99.22	510	forward
CNT30116486	Oryza rufipogon	Oryza nivara	100	85.43	99.8	510	forward

Expression of CNT30101469

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MRDIYAIKVMLALLRLHACNRDQYVIGWSV*

>peptide 2 (66 aa)
MDEACGQLAISKNKSYEAEIAALKNQNAALQMKIQALENYRQAKHKEYAELETIYKKLKAKHSNCR*

Sequence

>CNT30101469
TGAACAAGTGTTGTAGTTCTGCAAACAGAACTAGCTACGATATATCTAGCTCAATATAATGGATGAAGCATGTGGTCAGCTAGCAATAAGCAAGAACAAA
TCGTACGAGGCTGAAATCGCTGCCTTGAAGAATCAAAATGCAGCCCTCCAGATGAAGATACAAGCACTGGAGAATTACAGGCAGGCTAAGCACAAAGAGT
ATGCAGAACTGGAAACCATATATAAGAAGCTCAAAGCAAAGCACAGCAACTGTCGTTGATAAAATGGATTAAATTGTATATACCCTTGCATGTACCTACG
TACTATTAGTGCATGGGAGTATACTATATATGTGTGTGCCGAGAATAAAGCTGTATACTGATCAAGCTATATCGTAGTAGTACGTCTAAACGTATGTAAC
CTGAATGCATGCGAGATATATATGCAATAAAGGTCATGCTAGCTCTCCTTCGTCTCCATGCGTGTAATAGAGATCAATATGTAATTGGCTGGTCAGTATA
ATCAGTGGAT