Detailed information on CNT30100797


BLAST search results

BLAST vs Swiss-Prot:
sp|P20144|WUN1_SOLTU, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136604Oryza rufipogonLolium perenne34.2239.7689.52334forward

Expression of CNT30100797

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MEPPLEVRREQLLRPARVPGVERLVQPQHQELGV

>peptide 2 (41 aa)
MLLVTLLIQLSDKQAKATLLNWLASCSSGSGINHANLKQLS*

>peptide 3 (34 aa)
MQQQQTIIHIQPRFSFTVEGVHTYIIHNDLDQSY*

>peptide 4 (63 aa)
RFIWNPRRNENGGKEEKRSTCTSHMLILSVQQNKLRVLLCNNNRPSFIFSHGLALPWKEYTLT*

>peptide 5 (47 aa)
MSFEFVLRWRGRGPAATCARGRRGGSATGTWAWTAAAAAPKRRRRGG*

>peptide 6 (70 aa)
MTVEPKASTERGEKRNLDSPWSAPVRRRIMCWCAGGPWNHHSRSGASSSCALRASPELSASYSRSTRNLAS

>peptide 7 (66 aa)
MARTRPGSDLCARSARRLCHRHLGLDGGGGGAEEEAERRVTVRSVLKYSLSWVITPSGPTVQACTQ*

Sequence

>CNT30100797
TCGGTTCATTTGGAACCCAAGAAGGAATGAAAATGGGGGGAAAGAAGAGAAAAGAAGTACCTGTACATCACATATGTTGATTTTAAGTGTCCAACAAAAC
AAGCTACGAGTACTTTTATGCAACAACAACAGACCATCATTCATATTCAGCCACGGTTTAGCTTTACCGTGGAAGGAGTACACACTTACATAATCCATAA
TGACTTGGACCAAAGCTACTGATGCTACTGGTCACACTGCTGATTCAGCTTTCAGACAAGCAAGCAAAAGCAACACTACTTAACTGGCTGGCTAGTTGCA
GTAGTGGTAGTGGGATTAATCACGCAAACCTGAAGCAGCTCAGTTGAGCTGAGCGGCTTTAGCCCATAAGCAATAAACTATAGCTAGTGACTTCACTCAG
TGCGTGCGCTTCCGTTTTTATTTATTTAGCTAATCACTATTGATAAGTATCGCTTGATTTTTTTATATGTGATTAATTTAGGGAAGCTTTTTGCGCCTTG
AGTTCTTGATGTCTTTTGAGTTCGTTCTTAGATGGCGAGGACGAGGCCCGGCAGCGACTTGTGCGCGCGGTCGGCGCGGCGGCTCTGCCACAGGCACTTG
GGCTTGGACGGCGGCGGCGGCGGCGCCGAAGAGGAGGCGGAGAGGCGGGTGACGGTGAGGTCGGTGTTGAAGTACTCCCTGAGCTGGGTGATTACCCCAT
CGGGGCCGACGGTCCAGGCGTGCACCCAGTAGAGCTGGCGGGTGTCGTCGGTGCCCTCGGCGATGACGGTGGAGCCGAAGGCGTCGACGGAGCGAGGGGA
GAAGAGGAACCTTGACTCGCCGTGGTCGGCGCCGGTGAGGAGGCGCATCATGTGCTGGTGCGCCGGCGGCCCATGGAACCACCACTCGAGGTCCGGCGCG
AGCAGCTCCTGCGCCCTGCGCGCGTCCCCGGAGTTGAGCGCCTCGTACAGCCGCAGCACCAGGAACTTGGCGTCCT