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Detailed information on CNT30100392


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670851Oryza rufipogonSetaria viridis37.7810093.53201forward

Expression of CNT30100392

Peptides detected in this lncRNA

>peptide 1 (44 aa)
KKERPDNPILKLLPRFLIVQIIGQLIKQPESKAASTDTLTHREK*

>peptide 2 (29 aa)
MGRSRRTPAAAPPSAPPPSLSPLSFSLLAA

Sequence

>CNT30100392
AAAAAAGAAAGACCAGACAATCCAATACTTAAATTACTCCCCAGATTTCTTATTGTTCAGATTATTGGGCAGCTAATCAAGCAACCAGAGAGCAAAGCTG
CAAGCACAGACACACTGACACACAGGGAGAAGTAATAATAAGTTACACATGGAATTACGGATGGAATTAAGCTGTAGAGCACAAGAGGATACAATAATCT
AAGGGTTGATTTGGGGGGATTTTTTTTTTTCATTCGGTGAGGCGGGCGACGACGGGGTACTTGGCCTGGAACTTGGTCTCCCAGTCGGCGAGGACGCCGA
GCTCCTTGTCGGAGAGGCCGGAGAGCGCGCGGCTGGCCTCGCGGCCGGCGAAGACGGCGTAGGCGCCGCCGGGGCCGTAGAAGCCGCGGCCGGAGGTGAC
GTCGTAGACCTTGCCGCGGACGGAGACGTAGATCGGCTTCGATGGGTCGCTCCCGTCGTACGCCCGCAGCTGCGCCGCCGTCAGCTCCGCCGCCATCTCT
CTCTCCTCTCTCTTTCTCTCTCCTCGCGGCTG